STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ65749.1Response regulator containing a CheY-like receiver domain and an HD-GYP domain protein; PFAM: HD domain. (663 aa)    
Predicted Functional Partners:
AFZ67433.1
PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.851
AFZ69138.1
PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.847
AFZ67890.1
PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain.
  
 
 0.846
AFZ65788.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.818
AFZ66307.1
PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.812
AFZ67616.1
PFAM: EAL domain; GGDEF domain; family; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.800
AFZ65667.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.780
AFZ67720.1
PFAM: HAMP domain; GGDEF domain; CHASE3 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.780
AFZ65848.1
MHYT domain-containing protein.
  
 
 0.760
AFZ66836.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.748
Your Current Organism:
Deinococcus peraridilitoris
NCBI taxonomy Id: 937777
Other names: D. peraridilitoris DSM 19664, Deinococcus peraridilitoris DSM 19664, Deinococcus peraridilitoris KR-200, Deinococcus peraridilitoris str. DSM 19664, Deinococcus peraridilitoris strain DSM 19664
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