STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001618145_00998Unannotated protein. (112 aa)    
Predicted Functional Partners:
GCA_001618145_03294
Unannotated protein.
     
 0.668
GCA_001618145_02509
Unannotated protein.
  
  
 0.667
GCA_001618145_03291
Unannotated protein.
    
  0.613
GCA_001618145_03298
Unannotated protein.
     
 0.599
GCA_001618145_00997
Unannotated protein.
       0.529
GCA_001618145_01600
Unannotated protein.
  
    0.429
GCA_001618145_00783
Unannotated protein.
    
  0.417
GCA_001618145_02514
Unannotated protein.
  
     0.408
Your Current Organism:
Oceanobacillus damuensis
NCBI taxonomy Id: 937928
Other names: DSM 26901, KCTC 33146, O. damuensis, Oceanobacillus damuensis Long et al. 2015, Ornithinibacillus sp. SCULCB PT-20, strain PT-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.