STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312365_00354Unannotated protein. (477 aa)    
Predicted Functional Partners:
GCA_000312365_00355
Unannotated protein.
 
 0.991
GCA_000312365_00353
Unannotated protein.
 
  
 0.971
GCA_000312365_00352
Unannotated protein.
 
  
 0.948
GCA_000312365_00234
Unannotated protein.
 
 0.916
GCA_000312365_01750
Unannotated protein.
 
 0.908
GCA_000312365_00226
Unannotated protein.
 
 0.905
GCA_000312365_01933
Unannotated protein.
 
 0.889
GCA_000312365_01131
Unannotated protein.
 
 0.883
GCA_000312365_00701
Unannotated protein.
 
 0.865
GCA_000312365_00273
Unannotated protein.
 
 0.853
Your Current Organism:
Anaerococcus provencensis
NCBI taxonomy Id: 938293
Other names: A. provencensis, Anaerococcus provencensis corrig. Pagnier et al. 2017, Anaerococcus provenciensis, Anaerococcus sp. 9402080, CSUR P121, DSM 26345, strain 9402080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.