STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312365_00641Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_000312365_00479
Unannotated protein.
    
  0.913
GCA_000312365_00642
Unannotated protein.
 
   
 0.693
GCA_000312365_00647
Unannotated protein.
 
    0.673
GCA_000312365_00644
Unannotated protein.
 
    0.639
GCA_000312365_00645
Unannotated protein.
 
     0.573
GCA_000312365_00643
Unannotated protein.
  
    0.535
GCA_000312365_00646
Unannotated protein.
       0.471
GCA_000312365_00584
Unannotated protein.
 
    0.432
GCA_000312365_01275
Unannotated protein.
 
    0.407
Your Current Organism:
Anaerococcus provencensis
NCBI taxonomy Id: 938293
Other names: A. provencensis, Anaerococcus provencensis corrig. Pagnier et al. 2017, Anaerococcus provenciensis, Anaerococcus sp. 9402080, CSUR P121, DSM 26345, strain 9402080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.