STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312365_00818Unannotated protein. (388 aa)    
Predicted Functional Partners:
GCA_000312365_02083
Unannotated protein.
 
  
  0.901
GCA_000312365_02066
Unannotated protein.
    
 0.896
GCA_000312365_00261
Unannotated protein.
    
  0.869
GCA_000312365_01797
Unannotated protein.
    
  0.867
GCA_000312365_01399
Unannotated protein.
     
 0.864
GCA_000312365_00819
Unannotated protein.
  
    0.803
GCA_000312365_00496
Unannotated protein.
    
  0.697
GCA_000312365_00791
Unannotated protein.
    
  0.697
GCA_000312365_01871
Unannotated protein.
    
  0.697
GCA_000312365_00535
Unannotated protein.
  
 
  0.553
Your Current Organism:
Anaerococcus provencensis
NCBI taxonomy Id: 938293
Other names: A. provencensis, Anaerococcus provencensis corrig. Pagnier et al. 2017, Anaerococcus provenciensis, Anaerococcus sp. 9402080, CSUR P121, DSM 26345, strain 9402080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.