STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312365_01565Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_000312365_00574
Unannotated protein.
  
 
 0.941
GCA_000312365_00283
Unannotated protein.
   
 0.932
GCA_000312365_00629
Unannotated protein.
    
  0.929
GCA_000312365_01957
Unannotated protein.
    
  0.926
GCA_000312365_00370
Unannotated protein.
  
 
 0.882
GCA_000312365_00117
Unannotated protein.
  
 
 0.812
GCA_000312365_01617
Unannotated protein.
 
 
 0.780
GCA_000312365_00996
Unannotated protein.
 
 
 0.775
GCA_000312365_00525
Unannotated protein.
 
 0.768
GCA_000312365_01501
Unannotated protein.
  
 
 0.752
Your Current Organism:
Anaerococcus provencensis
NCBI taxonomy Id: 938293
Other names: A. provencensis, Anaerococcus provencensis corrig. Pagnier et al. 2017, Anaerococcus provenciensis, Anaerococcus sp. 9402080, CSUR P121, DSM 26345, strain 9402080
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.