STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB10998.1Tripartite-type tricarboxylate transporter, receptor component TctC. (318 aa)    
Predicted Functional Partners:
SDB68001.1
TctA family transporter.
 
    0.805
SDB71091.1
TctA family transporter.
 
    0.775
SDB10943.1
Protein of unknown function.
       0.773
SDB10959.1
Sulfite reductase (NADPH) hemoprotein beta-component; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.773
SDB10977.1
Uncharacterized conserved protein, DUF934 family.
       0.773
SDB35385.1
Putative tricarboxylic transport membrane protein.
 
    0.763
SDB44542.1
TctA family transporter.
 
    0.749
SDB11014.1
CubicO group peptidase, beta-lactamase class C family.
       0.603
SDB10926.1
Predicted arabinose efflux permease, MFS family.
       0.514
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.