STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB11878.1Outer membrane protein TolC. (509 aa)    
Predicted Functional Partners:
SDB11856.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.907
SDB11833.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.901
SDB71718.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.808
SDB07673.1
HlyD family secretion protein.
 
 0.805
SDB61513.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.755
SDB71187.1
Carbohydrate-selective porin, OprB family.
  
   
 0.752
SDB70041.1
Phosphohistidine phosphatase SixA.
  
     0.745
SDB74681.1
HlyD family secretion protein.
 
 0.735
SDB68317.1
Membrane fusion protein, multidrug efflux system.
  
 0.703
SDB70616.1
Membrane fusion protein, multidrug efflux system.
  
 0.703
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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