STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB17225.1Cytochrome b pre-mRNA-processing protein 3. (185 aa)    
Predicted Functional Partners:
SDB17206.1
Uncharacterized metal-binding protein YceD, DUF177 family.
 
     0.875
SDB70547.1
Hypothetical protein.
  
     0.742
SDB61409.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.708
SDB17244.1
Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex.
       0.662
SDB69753.1
Transcriptional regulator, MucR family.
  
     0.610
rpmF
Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.608
SDB34775.1
Hypothetical protein.
  
     0.605
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.603
SDB68789.1
Chemotaxis protein CheZ.
  
     0.603
SDB64534.1
DNA polymerase III, delta subunit.
  
     0.602
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.