STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB17244.1Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex. (178 aa)    
Predicted Functional Partners:
bamA
Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.970
bamD
Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.959
SDB74194.1
PQQ-like domain-containing protein.
  
 
 
 0.928
SDB17206.1
Uncharacterized metal-binding protein YceD, DUF177 family.
 
     0.798
SDB64471.1
Protein of unknown function.
  
     0.744
SDB44928.1
Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family.
  
   
 0.712
SDB31764.1
Hypothetical protein.
  
   
 0.710
SDB69735.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 
 0.705
SDB69572.1
ATP-dependent helicase/nuclease subunit B.
  
     0.673
SDB17225.1
Cytochrome b pre-mRNA-processing protein 3.
       0.662
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.