STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB67213.1FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. (451 aa)    
Predicted Functional Partners:
SDB28685.1
Amino acid adenylation domain-containing protein.
   
 0.857
SDB67193.1
Protein of unknown function.
       0.773
SDB67200.1
Protein of unknown function.
       0.773
SDB67207.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.773
SDB67220.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
       0.746
SDB67226.1
malyl-CoA/(S)-citramalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
       0.746
SDB68996.1
Alkanesulfonate monooxygenase.
  
     0.732
SDB28640.1
Amino acid adenylation domain-containing protein.
   
 0.710
SDB69712.1
Alkanesulfonate monooxygenase.
  
     0.628
SDB67236.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.551
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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