STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB68649.1Beta-lactamase class A. (281 aa)    
Predicted Functional Partners:
SDB14914.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
    
 0.829
leuC
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.773
leuD
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
       0.773
SDB68637.1
Predicted arabinose efflux permease, MFS family.
       0.516
SDB28685.1
Amino acid adenylation domain-containing protein.
 
   
 0.484
SDB71225.1
Penicillin-binding protein 1A.
   
 
 0.476
SDB74663.1
Penicillin-binding protein 1A.
   
 
 0.476
SDB68632.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.461
SDB15144.1
Acyl transferase domain-containing protein.
 
   
 0.456
SDB07817.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
    
  0.443
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.