STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB70490.1Lysophospholipase L1. (441 aa)    
Predicted Functional Partners:
SDB55130.1
Ca-dependent carbohydrate-binding module xylan-binding.
 
 0.715
SDB36361.1
Endo-1,4-beta-xylanase.
 
  
 0.689
SDB69819.1
Hypothetical protein.
  
 0.649
SDB72540.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
  
 0.609
SDB70492.1
Cupin domain-containing protein.
       0.605
SDB22652.1
Hypothetical protein.
   
 0.516
SDB61763.1
MJ0042 family finger-like domain-containing protein.
   
 0.516
SDB74014.1
Hypothetical protein.
   
 0.516
SDB74779.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
   
 0.516
SDB44077.1
Ca-dependent carbohydrate-binding module xylan-binding.
  
 
  0.510
Your Current Organism:
Belnapia rosea
NCBI taxonomy Id: 938405
Other names: B. rosea, Belnapia rosea Jin et al. 2012, Belnapia sp. CPCC 100156, CGMCC 1.10758, CPCC 100156, DSM 23312
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