STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000485495_00449Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_000485495_00429
Unannotated protein.
    
 0.998
GCA_000485495_00448
Unannotated protein.
 
    0.960
GCA_000485495_00578
Unannotated protein.
    
  0.957
GCA_000485495_00447
Unannotated protein.
 
     0.936
GCA_000485495_00446
Unannotated protein.
   
  0.908
GCA_000485495_00710
Unannotated protein.
    
  0.828
GCA_000485495_00450
Unannotated protein.
 
     0.807
GCA_000485495_01120
Unannotated protein.
  
  
  0.737
GCA_000485495_00230
Unannotated protein.
    
  0.733
GCA_000485495_00659
Unannotated protein.
    
  0.733
Your Current Organism:
actinobacterium SCGC AAA044D11
NCBI taxonomy Id: 938518
Other names: a. SCGC AAA044-D11, actinobacterium SCGC AAA044-D11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.