STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428285_01524Unannotated protein. (353 aa)    
Predicted Functional Partners:
GCA_000428285_01125
Unannotated protein.
 
 0.978
GCA_000428285_00668
Unannotated protein.
 
 
 0.972
GCA_000428285_01124
Unannotated protein.
 
 0.971
GCA_000428285_01999
Unannotated protein.
   
  0.950
GCA_000428285_01459
Unannotated protein.
 
 
 0.910
GCA_000428285_01709
Unannotated protein.
 
 
  0.892
GCA_000428285_01980
Unannotated protein.
  
  0.887
GCA_000428285_01680
Unannotated protein.
 
 
  0.841
GCA_000428285_01069
Unannotated protein.
    
 0.806
GCA_000428285_00783
Unannotated protein.
  
 
 
0.788
Your Current Organism:
beta proteobacterium SCGC AAA027K21
NCBI taxonomy Id: 938785
Other names: b. proteobacterium SCGC AAA027-K21, beta proteobacterium SCGC AAA027-K21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.