STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428285_01531Unannotated protein. (488 aa)    
Predicted Functional Partners:
GCA_000428285_01530
Unannotated protein.
 
  0.970
GCA_000428285_00982
Unannotated protein.
 
 0.961
GCA_000428285_00331
Unannotated protein.
  
  0.954
GCA_000428285_01484
Unannotated protein.
  
  0.943
GCA_000428285_01529
Unannotated protein.
  
  0.921
GCA_000428285_01274
Unannotated protein.
  
  0.915
GCA_000428285_00337
Unannotated protein.
  
  0.889
GCA_000428285_00332
Unannotated protein.
 
 
  0.856
GCA_000428285_01701
Unannotated protein.
   
  0.842
GCA_000428285_01703
Unannotated protein.
   
  0.840
Your Current Organism:
beta proteobacterium SCGC AAA027K21
NCBI taxonomy Id: 938785
Other names: b. proteobacterium SCGC AAA027-K21, beta proteobacterium SCGC AAA027-K21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.