STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428285_01846Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_000428285_00341
Unannotated protein.
 
 0.849
GCA_000428285_00525
Unannotated protein.
   
 0.834
GCA_000428285_00524
Unannotated protein.
   
 0.806
GCA_000428285_00512
Unannotated protein.
   
 0.698
GCA_000428285_01883
Unannotated protein.
     
 0.683
GCA_000428285_01527
Unannotated protein.
  
  
  0.624
GCA_000428285_01249
Unannotated protein.
    
   0.611
GCA_000428285_02094
Unannotated protein.
 
  
  0.593
GCA_000428285_00828
Unannotated protein.
 
  
  0.584
GCA_000428285_02053
Unannotated protein.
  
  
  0.548
Your Current Organism:
beta proteobacterium SCGC AAA027K21
NCBI taxonomy Id: 938785
Other names: b. proteobacterium SCGC AAA027-K21, beta proteobacterium SCGC AAA027-K21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.