STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore-associated protein 1. (288 aa)    
Predicted Functional Partners:
SKA3
Spindle and kinetochore-associated protein 3.
   
 
 0.956
SKA2
Spindle and kinetochore-associated protein 2.
   
 
 0.949
ESPL1
Separase.
   
 
 0.791
CDK1
Cyclin-dependent kinase 1.
   
 
 0.786
NDC80
Kinetochore protein NDC80 homolog.
   
 
 0.773
NUF2
Kinetochore protein Nuf2.
   
  
 0.771
LIPG
Endothelial lipase isoform X2.
      
 0.750
SMAD4
SMAD family member 4.
      
 0.746
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 
 0.742
CTIF
CBP80/20-dependent translation initiation factor isoform X1.
      
 0.735
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.