STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSEN54tRNA splicing endonuclease subunit 54. (508 aa)    
Predicted Functional Partners:
TSEN15
TRNA-splicing endonuclease subunit Sen15.
    
 0.999
TSEN2
tRNA splicing endonuclease subunit 2.
    
 0.980
TSEN34
TRNA-splicing endonuclease subunit Sen34 isoform X1.
   
 0.831
CLP1
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
    
 0.742
INTS1
Integrator complex subunit 1 isoform X1.
      
 0.630
EXOSC9
Exosome complex component RRP45.
   
  
 0.625
EXOSC3
Exosome complex component RRP40.
      
 0.608
RARS2
Probable arginine--tRNA ligase, mitochondrial.
      
 0.594
PPP3R1
Serine/threonine-protein phosphatase 2B regulatory subunit.
      
 0.560
CPSF1
Cleavage and polyadenylation specific factor 1.
     
 0.557
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.