STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM1Isthmin-1. (462 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
   
 0.878
SORD
Sorbitol dehydrogenase isoform X1.
  
 
 0.685
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.666
KDSR
3-ketodihydrosphingosine reductase isoform X1.
     
 0.614
SPTSSB
Serine palmitoyltransferase small subunit B isoform X1.
    
 0.578
ARHGAP20
Rho GTPase activating protein 20.
      
 0.568
CLIC6
Chloride intracellular channel protein 6.
      
 0.567
ALAD
Delta-aminolevulinic acid dehydratase.
    
 0.558
LAMA3
LOW QUALITY PROTEIN: laminin subunit alpha-3.
      
 0.516
ADHFE1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial.
    
 0.513
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.