STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107325785Keratin, type II cytoskeletal cochleal. (491 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X1.
    
 0.741
ACTR5
Actin-related protein 5.
    
 0.573
TFPT
TCF3 fusion partner.
   
 0.567
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.559
LOC107325791
Keratin, type II cytoskeletal 8 isoform X1.
  
0.553
MCRS1
Microspherule protein 1.
    
 0.551
INO80D
INO80 complex subunit D.
    
 0.541
INO80C
INO80 complex subunit C.
    
 0.535
ACTR8
Actin-related protein 8 isoform X1.
    
 0.533
INO80
Chromatin-remodeling ATPase INO80.
    
  0.520
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.