STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHMT2Serine hydroxymethyltransferase 2. (479 aa)    
Predicted Functional Partners:
LOC107322963
Trifunctional purine biosynthetic protein adenosine-3-like isoform X1.
  
 0.990
GART
Trifunctional purine biosynthetic protein adenosine-3.
  
 0.990
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial.
  
 
 0.961
GCSH
Glycine cleavage system H protein, mitochondrial.
  
 
 0.945
MTHFR
Methylenetetrahydrofolate reductase isoform X1.
  
 
 0.930
FPGS
Folylpolyglutamate synthase.
  
 0.916
PSPH
Phosphoserine phosphatase.
  
 0.915
TYMS
Thymidylate synthase.
  
 
 0.913
DHFR
Dihydrofolate reductase isoform X1.
  
 
 0.912
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.911
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.