STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107323374Tumor necrosis factor receptor superfamily member 8 isoform X1. (459 aa)    
Predicted Functional Partners:
TNFSF8
Tumor necrosis factor ligand superfamily member 8.
   
 
 0.992
TNFSF11
Tumor necrosis factor ligand superfamily member 11 isoform X3.
   
 
 0.661
TNFRSF13C
Tumor necrosis factor receptor superfamily member 13C isoform X1.
  
  
 0.651
TNFSF13B
Tumor necrosis factor ligand superfamily member 13B isoform X1.
  
 
 0.648
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
      
 0.588
CD40LG
Tumor necrosis factor ligand superfamily member 5.
   
 
 0.558
IL1B
Interleukin 1 beta.
   
  
 0.533
TRAF3
TNF receptor-associated factor 3 isoform X1.
   
 0.520
TRAF5
TNF receptor-associated factor 5.
   
 0.520
TRAF1
TNF receptor associated factor 1.
   
 0.520
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.