STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107323034BPI fold-containing family B member 4-like. (464 aa)    
Predicted Functional Partners:
RARRES1
Ovocalyxin-32-like.
      
 0.807
LOC107313329
Ovocleidin-116-like.
      
 0.804
LOC107323044
Protein TENP-like isoform X1.
     
 0.751
TMEM42
Transmembrane protein 42.
   
 
 0.610
GKN2
Gastrokine 2.
      
 0.593
OTOP3
Otopetrin 3.
      
 0.562
LY86
Lymphocyte antigen 86.
   
  
 0.485
GPNMB
Transmembrane glycoprotein NMB.
   
  
 0.481
MELTF
Melanoma-associated antigen p97.
      
 0.481
LXN
Latexin-like.
      
 0.478
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.