STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF121RING finger protein 121 isoform X1. (425 aa)    
Predicted Functional Partners:
RNF185
E3 ubiquitin-protein ligase RNF185.
 
    
 0.643
SF3A3
Splicing factor 3A subunit 3.
      
 0.612
UBE2E3
Ubiquitin-conjugating enzyme E2 E3 isoform X1.
      
 0.589
ENSCJPP00005002401
annotation not available
      
 0.565
XRCC5
X-ray repair cross-complementing protein 5.
      
 0.561
EXD3
Exonuclease mut-7 homolog isoform X1.
      
 0.461
DBF4B
Protein DBF4 homolog B isoform X1.
      
 0.461
UBE2N
Ubiquitin-conjugating enzyme E2 N.
      
 0.455
UBE2E1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 E1.
      
 0.403
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.