STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L3HYPDHTrans-3-hydroxy-L-proline dehydratase. (372 aa)    
Predicted Functional Partners:
DAO
D-amino-acid oxidase.
    
 0.933
TMEM109
Transmembrane protein 109.
    
 0.912
PYCR3
Pyrroline-5-carboxylate reductase 3.
    
 0.871
PYCR1
Pyrroline-5-carboxylate reductase 1, mitochondrial.
    
 0.829
LOC107306902
Ketimine reductase mu-crystallin-like.
 
  
 0.821
CRYM
Ketimine reductase mu-crystallin-like isoform X2.
 
  
 0.821
ENSCJPP00005023785
annotation not available
    
 0.773
HYKK
Hydroxylysine kinase.
   
  
 0.763
TMED8
Protein TMED8.
    
 0.735
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
      
 0.582
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.