STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH2AUsherin. (5245 aa)    
Predicted Functional Partners:
WHRN
Whirlin isoform X1.
    
 
 0.928
PDZD7
PDZ domain-containing protein 7 isoform X1.
    
 
 0.882
MYO7A
Unconventional myosin-VIIa isoform X4.
    
 
 0.833
USH1C
USH1 protein network component harmonin.
    
 
 0.817
USH1G
Usher syndrome type-1G protein isoform X1.
    
 0.814
PCDH15
Protocadherin-15 isoform X1.
   
  
 0.810
CDH23
Cadherin-23 isoform X1.
      
 0.805
ABCA4
Retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1.
   
  
 0.779
CIB2
Calcium and integrin-binding family member 2.
    
 0.762
LAMC3
Laminin subunit gamma-3 isoform X1.
   
0.629
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.