STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A isoform X1. (535 aa)    
Predicted Functional Partners:
TRABD
TraB domain-containing protein isoform X1.
      
 0.808
USP32
Ubiquitin carboxyl-terminal hydrolase 32 isoform X1.
    
 
 0.711
RPL8
Large subunit ribosomal protein L8e.
    
 
 0.685
RAB1A
Ras-related protein Rab-1A.
    
 
 0.632
LOC107319395
Hepatocyte nuclear factor 4-beta-like isoform X1.
      
 0.629
SGMS1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
      
 0.613
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1.
      
 0.613
CKMT1A
Creatine kinase U-type, mitochondrial isoform X2.
      
 0.612
ACBD3
Golgi resident protein GCP60.
    
 
 0.592
MRPS6
28S ribosomal protein S6, mitochondrial isoform X2.
    
   0.590
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.