STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX11Transcription factor SOX11/12 (SOX group C). (396 aa)    
Predicted Functional Partners:
TCF7
Transcription factor 7 isoform X1.
    
0.575
CTNNB1
Catenin beta-1 isoform X1.
    
 0.560
LEF1
Lymphoid enhancer-binding factor 1 isoform X1.
    
0.538
GYS2
Glycogen [starch] synthase, liver isoform X1.
    
 
 0.525
JUP
Junction plakoglobin.
    
 0.521
SOX6
Transcription factor SOX5/6/13 (SOX group D).
    
0.460
TCF7L1
Transcription factor 7-like 1.
    
0.459
TCF7L2
Transcription factor 7-like 2 isoform X1.
    
0.459
LOC107321581
POU domain, class 5, transcription factor 3.
    
 0.442
SOX30
Transcription factor SOX15/30.
     
0.423
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.