STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM1PR domain zinc finger protein 1. (789 aa)    
Predicted Functional Partners:
STAT3
Signal transducer and activator of transcription 3 isoform X1.
   
 
 0.586
DAZL
Deleted in azoospermia-like isoform X1.
      
 0.586
BACH2
Transcription regulator protein BACH2.
    
 
 0.571
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
 0.571
XBP1
X box-binding protein 1.
   
  
 0.567
AICDA
Single-stranded DNA cytosine deaminase.
      
 0.556
DDX4
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX4.
      
 0.554
TFAP2C
Transcription factor AP-2 gamma.
      
 0.483
TSPAN8
LOW QUALITY PROTEIN: tetraspanin-8.
      
 0.483
BRCA2
Breast cancer type 2 susceptibility protein.
      
 0.483
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.