STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC39ATetratricopeptide repeat domain 39A. (529 aa)    
Predicted Functional Partners:
SNORC
Protein SNORC.
      
 0.612
SYT8
Synaptotagmin-8.
   
  
 0.596
GPR149
Probable G-protein coupled receptor 149 isoform X1.
      
 0.584
RNF152
E3 ubiquitin-protein ligase RNF152.
      
 0.583
GPR87
G protein-coupled receptor 87.
      
 0.583
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3 isoform X1.
   
  
 0.572
GTSF1
Gametocyte specific factor 1.
      
 0.562
TDRKH
Tudor and KH domain-containing protein.
      
 0.560
PNLDC1
Poly(A)-specific ribonuclease PNLDC1 isoform X1.
      
 0.558
FKBP6
Inactive peptidyl-prolyl cis-trans isomerase FKBP6.
      
 0.483
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.