STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI13'-5' exoribonuclease 1 isoform X1. (373 aa)    
Predicted Functional Partners:
GTSF1
Gametocyte specific factor 1.
    
 
 0.866
GTSF1-2
Gametocyte specific factor 1.
    
 
 0.834
LOC107314039
Uncharacterized protein LOC107314039.
   
 
 0.781
SLBP
Histone RNA hairpin-binding protein.
   
 
 0.781
XRN2
5'-3' exoribonuclease 2 isoform X1.
      
 0.765
RPL30
Large subunit ribosomal protein L30e.
     
 0.763
SARS1
Serine--tRNA ligase, cytoplasmic.
      
 0.690
DICER1
Endoribonuclease Dicer.
    
 
 0.675
RPL4
Large subunit ribosomal protein L4e.
    
 0.657
DROSHA
Ribonuclease III.
   
 
 0.634
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.