STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REREArginine-glutamic acid dipeptide repeats protein isoform X1. (1548 aa)    
Predicted Functional Partners:
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.689
FAT3
Protocadherin Fat 3 isoform X1.
    
 0.598
UNC79
Protein unc-79 homolog isoform X1.
      
 0.595
HDAC2
Histone deacetylase 1/2.
    
 0.556
HERC2
E3 ubiquitin-protein ligase HERC2 isoform X1.
      
 0.461
H6PD
GDH/6PGL endoplasmic bifunctional protein.
      
 0.422
FAT2
Protocadherin Fat 1/2/3.
    
 0.408
FAT1
Protocadherin Fat 1 isoform X1.
    
 0.408
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.