Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL18A1 | COL26A1 | ENSCJPP00005015419 | ENSCJPP00005010768 | Collagen alpha-1(XVIII) chain isoform X1. | Collagen type XXVI alpha 1 chain. | 0.459 |
COL18A1 | COL6A2 | ENSCJPP00005015419 | ENSCJPP00005015413 | Collagen alpha-1(XVIII) chain isoform X1. | Collagen alpha-2(VI) chain isoform X1. | 0.436 |
COL18A1 | ENSCJPP00005016375 | ENSCJPP00005015419 | ENSCJPP00005016375 | Collagen alpha-1(XVIII) chain isoform X1. | Carboxypeptidase N regulatory subunit. | 0.434 |
COL18A1 | GLCE | ENSCJPP00005015419 | ENSCJPP00005027045 | Collagen alpha-1(XVIII) chain isoform X1. | Heparosan-N-sulfate-glucuronate 5-epimerase. | 0.537 |
COL18A1 | LAMB1 | ENSCJPP00005015419 | ENSCJPP00005007650 | Collagen alpha-1(XVIII) chain isoform X1. | Laminin subunit beta-1. | 0.486 |
COL18A1 | LAMC1 | ENSCJPP00005015419 | ENSCJPP00005027510 | Collagen alpha-1(XVIII) chain isoform X1. | Laminin subunit gamma-1. | 0.418 |
COL18A1 | MMP9 | ENSCJPP00005015419 | ENSCJPP00005007088 | Collagen alpha-1(XVIII) chain isoform X1. | Matrix metalloproteinase-9 (gelatinase B). | 0.561 |
COL18A1 | PLOD1 | ENSCJPP00005015419 | ENSCJPP00005006963 | Collagen alpha-1(XVIII) chain isoform X1. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1. | 0.403 |
COL18A1 | VWA2 | ENSCJPP00005015419 | ENSCJPP00005025580 | Collagen alpha-1(XVIII) chain isoform X1. | Von Willebrand factor A domain-containing protein 2 isoform X2. | 0.456 |
COL26A1 | COL18A1 | ENSCJPP00005010768 | ENSCJPP00005015419 | Collagen type XXVI alpha 1 chain. | Collagen alpha-1(XVIII) chain isoform X1. | 0.459 |
COL26A1 | LAMB1 | ENSCJPP00005010768 | ENSCJPP00005007650 | Collagen type XXVI alpha 1 chain. | Laminin subunit beta-1. | 0.541 |
COL26A1 | LAMC1 | ENSCJPP00005010768 | ENSCJPP00005027510 | Collagen type XXVI alpha 1 chain. | Laminin subunit gamma-1. | 0.552 |
COL6A2 | COL18A1 | ENSCJPP00005015413 | ENSCJPP00005015419 | Collagen alpha-2(VI) chain isoform X1. | Collagen alpha-1(XVIII) chain isoform X1. | 0.436 |
COL6A2 | LAMB1 | ENSCJPP00005015413 | ENSCJPP00005007650 | Collagen alpha-2(VI) chain isoform X1. | Laminin subunit beta-1. | 0.531 |
COL6A2 | PLOD1 | ENSCJPP00005015413 | ENSCJPP00005006963 | Collagen alpha-2(VI) chain isoform X1. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1. | 0.589 |
ENSCJPP00005016375 | COL18A1 | ENSCJPP00005016375 | ENSCJPP00005015419 | Carboxypeptidase N regulatory subunit. | Collagen alpha-1(XVIII) chain isoform X1. | 0.434 |
GLCE | COL18A1 | ENSCJPP00005027045 | ENSCJPP00005015419 | Heparosan-N-sulfate-glucuronate 5-epimerase. | Collagen alpha-1(XVIII) chain isoform X1. | 0.537 |
LAMB1 | COL18A1 | ENSCJPP00005007650 | ENSCJPP00005015419 | Laminin subunit beta-1. | Collagen alpha-1(XVIII) chain isoform X1. | 0.486 |
LAMB1 | COL26A1 | ENSCJPP00005007650 | ENSCJPP00005010768 | Laminin subunit beta-1. | Collagen type XXVI alpha 1 chain. | 0.541 |
LAMB1 | COL6A2 | ENSCJPP00005007650 | ENSCJPP00005015413 | Laminin subunit beta-1. | Collagen alpha-2(VI) chain isoform X1. | 0.531 |
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