IKBKE protein (Coturnix japonica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IKBKE

Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1. (167 aa)

Predicted Functional Partners:

STING1

0.988

TANK

0.988

TRAF3

0.987

IRF7

0.960

LOC107310621

0.957

CYLD

0.957

STAT1

0.949

SIKE1

0.933

TBK1

0.908

LSP1

0.904

Your Current Organism:

Coturnix japonica

NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYLD	IKBKE	ENSCJPP00005017606	ENSCJPP00005018459	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	0.957
CYLD	LOC107310621	ENSCJPP00005017606	ENSCJPP00005012575	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	0.902
CYLD	LSP1	ENSCJPP00005017606	ENSCJPP00005023411	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	Lymphocyte-specific protein 1 isoform X1.	0.906
CYLD	TBK1	ENSCJPP00005017606	ENSCJPP00005019385	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	Serine/threonine-protein kinase TBK1.	0.699
CYLD	TRAF3	ENSCJPP00005017606	ENSCJPP00005002532	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	TNF receptor-associated factor 3 isoform X1.	0.773
IKBKE	CYLD	ENSCJPP00005018459	ENSCJPP00005017606	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.	0.957
IKBKE	IRF7	ENSCJPP00005018459	ENSCJPP00005023258	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Interferon regulatory factor 7 isoform X1.	0.960
IKBKE	LOC107310621	ENSCJPP00005018459	ENSCJPP00005012575	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	0.957
IKBKE	LSP1	ENSCJPP00005018459	ENSCJPP00005023411	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Lymphocyte-specific protein 1 isoform X1.	0.904
IKBKE	SIKE1	ENSCJPP00005018459	ENSCJPP00005022252	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Suppressor of IKK-epsilon.	0.933
IKBKE	STAT1	ENSCJPP00005018459	ENSCJPP00005010870	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Signal transducer and activator of transcription 1-alpha/beta isoform X1.	0.949
IKBKE	STING1	ENSCJPP00005018459	ENSCJPP00005014722	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Stimulator of interferon genes protein.	0.988
IKBKE	TANK	ENSCJPP00005018459	ENSCJPP00005017547	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	TRAF family member-associated NF-kappa-B activator isoform X1.	0.988
IKBKE	TBK1	ENSCJPP00005018459	ENSCJPP00005019385	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	Serine/threonine-protein kinase TBK1.	0.908
IKBKE	TRAF3	ENSCJPP00005018459	ENSCJPP00005002532	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	TNF receptor-associated factor 3 isoform X1.	0.987
IRF7	IKBKE	ENSCJPP00005023258	ENSCJPP00005018459	Interferon regulatory factor 7 isoform X1.	Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.	0.960
IRF7	STAT1	ENSCJPP00005023258	ENSCJPP00005010870	Interferon regulatory factor 7 isoform X1.	Signal transducer and activator of transcription 1-alpha/beta isoform X1.	0.940
IRF7	STING1	ENSCJPP00005023258	ENSCJPP00005014722	Interferon regulatory factor 7 isoform X1.	Stimulator of interferon genes protein.	0.725
IRF7	TANK	ENSCJPP00005023258	ENSCJPP00005017547	Interferon regulatory factor 7 isoform X1.	TRAF family member-associated NF-kappa-B activator isoform X1.	0.795
IRF7	TBK1	ENSCJPP00005023258	ENSCJPP00005019385	Interferon regulatory factor 7 isoform X1.	Serine/threonine-protein kinase TBK1.	0.998

page 1 of 3

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About