Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATL1 | RTN4 | ENSCJPP00005008817 | ENSCJPP00005019793 | Atlastin-1 isoform X1. | Reticulon-4 isoform X1. | 0.647 |
ATL2 | RTN4 | ENSCJPP00005004457 | ENSCJPP00005019793 | Atlastin-2 isoform X1. | Reticulon-4 isoform X1. | 0.647 |
GCH1 | RTN4 | ENSCJPP00005006751 | ENSCJPP00005019793 | GTP cyclohydrolase IA. | Reticulon-4 isoform X1. | 0.587 |
GCH1 | VTA1 | ENSCJPP00005006751 | ENSCJPP00005010029 | GTP cyclohydrolase IA. | Vacuolar protein sorting-associated protein VTA1 homolog. | 0.902 |
LINGO1 | OMG | ENSCJPP00005009062 | ENSCJPP00005023589 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | Oligodendrocyte myelin glycoprotein. | 0.887 |
LINGO1 | RHOA | ENSCJPP00005009062 | ENSCJPP00005012646 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | Ras homolog gene family, member A. | 0.721 |
LINGO1 | RTN4 | ENSCJPP00005009062 | ENSCJPP00005019793 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | Reticulon-4 isoform X1. | 0.883 |
LINGO1 | RTN4R | ENSCJPP00005009062 | ENSCJPP00005018202 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | Reticulon-4 receptor. | 0.642 |
OMG | LINGO1 | ENSCJPP00005023589 | ENSCJPP00005009062 | Oligodendrocyte myelin glycoprotein. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | 0.887 |
OMG | RHOA | ENSCJPP00005023589 | ENSCJPP00005012646 | Oligodendrocyte myelin glycoprotein. | Ras homolog gene family, member A. | 0.743 |
OMG | RTN4 | ENSCJPP00005023589 | ENSCJPP00005019793 | Oligodendrocyte myelin glycoprotein. | Reticulon-4 isoform X1. | 0.953 |
OMG | RTN4R | ENSCJPP00005023589 | ENSCJPP00005018202 | Oligodendrocyte myelin glycoprotein. | Reticulon-4 receptor. | 0.605 |
REEP6 | RTN4 | ENSCJPP00005012581 | ENSCJPP00005019793 | Receptor expression-enhancing protein 6 isoform X2. | Reticulon-4 isoform X1. | 0.584 |
RHOA | LINGO1 | ENSCJPP00005012646 | ENSCJPP00005009062 | Ras homolog gene family, member A. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | 0.721 |
RHOA | OMG | ENSCJPP00005012646 | ENSCJPP00005023589 | Ras homolog gene family, member A. | Oligodendrocyte myelin glycoprotein. | 0.743 |
RHOA | RTN4 | ENSCJPP00005012646 | ENSCJPP00005019793 | Ras homolog gene family, member A. | Reticulon-4 isoform X1. | 0.691 |
RTN4 | ATL1 | ENSCJPP00005019793 | ENSCJPP00005008817 | Reticulon-4 isoform X1. | Atlastin-1 isoform X1. | 0.647 |
RTN4 | ATL2 | ENSCJPP00005019793 | ENSCJPP00005004457 | Reticulon-4 isoform X1. | Atlastin-2 isoform X1. | 0.647 |
RTN4 | GCH1 | ENSCJPP00005019793 | ENSCJPP00005006751 | Reticulon-4 isoform X1. | GTP cyclohydrolase IA. | 0.587 |
RTN4 | LINGO1 | ENSCJPP00005019793 | ENSCJPP00005009062 | Reticulon-4 isoform X1. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein. | 0.883 |
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