STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM3U6 snRNA-associated Sm-like protein LSm3. (102 aa)    
Predicted Functional Partners:
LSM6
U6 snRNA-associated Sm-like protein LSm6 isoform X1.
   
 0.999
LSM7
LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7.
   
 0.999
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.999
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.998
ENSCJPP00005014235
annotation not available
   
 0.997
LSM1
U6 snRNA-associated Sm-like protein LSm1 isoform X1.
   
 0.997
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.995
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.992
SART3
Squamous cell carcinoma antigen recognized by T-cells 3.
    
 
 0.985
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 0.984
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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