STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD11Homeobox protein Hox-D11 isoform X1. (280 aa)    
Predicted Functional Partners:
EVX2
Homeobox even-skipped homolog protein 2.
   
 
0.647
ZP2
Zona pellucida sperm-binding protein 2 precursor.
      
 0.623
SALL1
Sal-like protein 1 isoform X1.
    
 
 0.613
SIX2
Homeobox protein SIX2.
      
 0.612
SHH
Sonic hedgehog protein.
      
 0.611
TBX4
T-box transcription factor TBX4.
    
 
 0.593
GLI3
Transcriptional activator GLI3 isoform X1.
    
 
 0.560
TBX5
T-box transcription factor TBX5 isoform X1.
    
 
 0.497
HAND2
Heart- and neural crest derivatives-expressed protein 2.
    
 
 0.490
SATB2
SATB homeobox 2.
      
 0.483
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.