STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPD4-hydroxyphenylpyruvate dioxygenase. (393 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 0.998
TAT
Tyrosine aminotransferase.
   
 
 0.986
GOT2
Aspartate aminotransferase, mitochondrial isoform X1.
  
 
 0.968
GOT1
Aspartate aminotransferase, cytoplasmic.
  
 
 0.968
MIF
Macrophage migration inhibitory factor.
     
 0.911
IL4I1
L-amino-acid oxidase.
     
  0.900
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
     
 0.891
FAH
Fumarylacetoacetase.
 
  
 0.771
MCCC2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform X2.
  
 
 0.758
LOC107317794
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.758
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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