STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTA1Metastasis-associated protein MTA1 isoform X1. (694 aa)    
Predicted Functional Partners:
RBBP4
Histone-binding protein RBBP4.
   
 0.926
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.899
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.897
RBBP7
Histone-binding protein RBBP7.
   
 0.869
HDAC1
Histone deacetylase 1/2.
   
 0.863
LOC107307002
Methyl-CpG-binding domain protein 3-like isoform X1.
   
 0.854
MBD3
Methyl-CpG-binding domain protein 3 isoform X1.
   
 0.854
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.850
WDR73
WD repeat-containing protein 73.
   
 0.810
GATAD2B
Transcriptional repressor p66-beta.
   
 0.774
Your Current Organism:
Coturnix japonica
NCBI taxonomy Id: 93934
Other names: C. japonica, Coturnix coturnix Japonicus, Coturnix coturnix japanica, Coturnix coturnix japonica, Coturnix japonica japonica, Japanese quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.