Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20615.1 | ARD20894.1 | SJ2017_0267 | SJ2017_0556 | Chemotaxis protein MotB; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB. | Pfam:pfam05656 Protein of unknown function (DUF805). | 0.418 |
ARD20894.1 | ARD20615.1 | SJ2017_0556 | SJ2017_0267 | Pfam:pfam05656 Protein of unknown function (DUF805). | Chemotaxis protein MotB; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB. | 0.418 |
ARD20894.1 | ARD20895.1 | SJ2017_0556 | SJ2017_0557 | Pfam:pfam05656 Protein of unknown function (DUF805). | Hypothetical protein. | 0.479 |
ARD20894.1 | ARD24326.1 | SJ2017_0556 | SJ2017_4098 | Pfam:pfam05656 Protein of unknown function (DUF805). | Endonuclease; Pfam:pfam01223 DNA/RNA non-specific endonuclease. | 0.597 |
ARD20895.1 | ARD20894.1 | SJ2017_0557 | SJ2017_0556 | Hypothetical protein. | Pfam:pfam05656 Protein of unknown function (DUF805). | 0.479 |
ARD24326.1 | ARD20894.1 | SJ2017_4098 | SJ2017_0556 | Endonuclease; Pfam:pfam01223 DNA/RNA non-specific endonuclease. | Pfam:pfam05656 Protein of unknown function (DUF805). | 0.597 |