Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20944.1 | ARD21456.1 | SJ2017_0606 | SJ2017_1129 | TetR family transcriptional regulator. | Cytochrome C. | 0.761 |
ARD20944.1 | ARD21844.1 | SJ2017_0606 | SJ2017_1525 | TetR family transcriptional regulator. | Pfam:pfam11949 Protein of unknown function (DUF3466). | 0.773 |
ARD20944.1 | ARD21856.1 | SJ2017_0606 | SJ2017_1539 | TetR family transcriptional regulator. | Pfam:pfam11854 Protein of unknown function (DUF3374). | 0.766 |
ARD20944.1 | ARD21965.1 | SJ2017_0606 | SJ2017_1652 | TetR family transcriptional regulator. | Hypothetical protein. | 0.762 |
ARD20944.1 | ARD22900.1 | SJ2017_0606 | SJ2017_2611 | TetR family transcriptional regulator. | Serine/threonine protein kinase; Pfam:pfam08378 Nuclease-related domain. | 0.767 |
ARD20944.1 | ARD23089.1 | SJ2017_0606 | SJ2017_2808 | TetR family transcriptional regulator. | Protein phosphatase; Pfam:pfam00782 Dual specificity phosphatase, catalytic domain. | 0.763 |
ARD20944.1 | ARD23155.1 | SJ2017_0606 | SJ2017_2877 | TetR family transcriptional regulator. | Hypothetical protein; Pfam:pfam13424 Tetratricopeptide repeat. | 0.769 |
ARD20944.1 | ARD23252.1 | SJ2017_0606 | SJ2017_2975 | TetR family transcriptional regulator. | DNA helicase; Pfam:pfam13538 UvrD-like helicase C-terminal domain. | 0.768 |
ARD20944.1 | ARD24168.1 | SJ2017_0606 | SJ2017_3939 | TetR family transcriptional regulator. | Hypothetical protein; Pfam:pfam13401 AAA domain. | 0.762 |
ARD20944.1 | ARD24313.1 | SJ2017_0606 | SJ2017_4085 | TetR family transcriptional regulator. | Hypothetical protein. | 0.771 |
ARD21456.1 | ARD20944.1 | SJ2017_1129 | SJ2017_0606 | Cytochrome C. | TetR family transcriptional regulator. | 0.761 |
ARD21456.1 | ARD21844.1 | SJ2017_1129 | SJ2017_1525 | Cytochrome C. | Pfam:pfam11949 Protein of unknown function (DUF3466). | 0.771 |
ARD21456.1 | ARD21856.1 | SJ2017_1129 | SJ2017_1539 | Cytochrome C. | Pfam:pfam11854 Protein of unknown function (DUF3374). | 0.792 |
ARD21456.1 | ARD21965.1 | SJ2017_1129 | SJ2017_1652 | Cytochrome C. | Hypothetical protein. | 0.634 |
ARD21456.1 | ARD22900.1 | SJ2017_1129 | SJ2017_2611 | Cytochrome C. | Serine/threonine protein kinase; Pfam:pfam08378 Nuclease-related domain. | 0.774 |
ARD21456.1 | ARD23089.1 | SJ2017_1129 | SJ2017_2808 | Cytochrome C. | Protein phosphatase; Pfam:pfam00782 Dual specificity phosphatase, catalytic domain. | 0.773 |
ARD21456.1 | ARD23155.1 | SJ2017_1129 | SJ2017_2877 | Cytochrome C. | Hypothetical protein; Pfam:pfam13424 Tetratricopeptide repeat. | 0.708 |
ARD21456.1 | ARD23252.1 | SJ2017_1129 | SJ2017_2975 | Cytochrome C. | DNA helicase; Pfam:pfam13538 UvrD-like helicase C-terminal domain. | 0.549 |
ARD21456.1 | ARD24168.1 | SJ2017_1129 | SJ2017_3939 | Cytochrome C. | Hypothetical protein; Pfam:pfam13401 AAA domain. | 0.739 |
ARD21456.1 | ARD24313.1 | SJ2017_1129 | SJ2017_4085 | Cytochrome C. | Hypothetical protein. | 0.736 |
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