Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD21116.1 | ARD21204.1 | SJ2017_0780 | SJ2017_0873 | Hypothetical protein. | Pfam:pfam03441 FAD binding domain of DNA photolyase. | 0.511 |
ARD21116.1 | ARD21205.1 | SJ2017_0780 | SJ2017_0874 | Hypothetical protein. | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | 0.424 |
ARD21116.1 | ARD21207.1 | SJ2017_0780 | SJ2017_0876 | Hypothetical protein. | Cryptochrome/photolyase family protein; Pfam:pfam04244 Deoxyribodipyrimidine photo-lyase-related protein. | 0.700 |
ARD21116.1 | ARD21208.1 | SJ2017_0780 | SJ2017_0877 | Hypothetical protein. | Pfam:pfam01613 Flavin reductase like domain. | 0.449 |
ARD21116.1 | ARD21492.1 | SJ2017_0780 | SJ2017_1165 | Hypothetical protein. | Deoxyribodipyrimidine photo-lyase type I; Pfam:pfam03441 FAD binding domain of DNA photolyase. | 0.464 |
ARD21116.1 | ARD21497.1 | SJ2017_0780 | SJ2017_1170 | Hypothetical protein. | Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase. | 0.503 |
ARD21116.1 | ARD21498.1 | SJ2017_0780 | SJ2017_1171 | Hypothetical protein. | Pfam:pfam07103 Protein of unknown function (DUF1365). | 0.416 |
ARD21116.1 | ARD21499.1 | SJ2017_0780 | SJ2017_1172 | Hypothetical protein. | Cyclopropane-fatty-acyl-phospholipid synthase; Pfam:pfam02353 Mycolic acid cyclopropane synthetase. | 0.568 |
ARD21116.1 | ARD21502.1 | SJ2017_0780 | SJ2017_1175 | Hypothetical protein. | Pfam:pfam12915 Protein of unknown function (DUF3833). | 0.420 |
ARD21204.1 | ARD21116.1 | SJ2017_0873 | SJ2017_0780 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Hypothetical protein. | 0.511 |
ARD21204.1 | ARD21205.1 | SJ2017_0873 | SJ2017_0874 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | 0.840 |
ARD21204.1 | ARD21206.1 | SJ2017_0873 | SJ2017_0875 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam10013 Uncharacterized protein conserved in bacteria (DUF2256). | 0.845 |
ARD21204.1 | ARD21207.1 | SJ2017_0873 | SJ2017_0876 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Cryptochrome/photolyase family protein; Pfam:pfam04244 Deoxyribodipyrimidine photo-lyase-related protein. | 0.943 |
ARD21204.1 | ARD21208.1 | SJ2017_0873 | SJ2017_0877 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam01613 Flavin reductase like domain. | 0.612 |
ARD21204.1 | ARD21497.1 | SJ2017_0873 | SJ2017_1170 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase. | 0.422 |
ARD21205.1 | ARD21116.1 | SJ2017_0874 | SJ2017_0780 | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | Hypothetical protein. | 0.424 |
ARD21205.1 | ARD21204.1 | SJ2017_0874 | SJ2017_0873 | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam03441 FAD binding domain of DNA photolyase. | 0.840 |
ARD21205.1 | ARD21206.1 | SJ2017_0874 | SJ2017_0875 | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam10013 Uncharacterized protein conserved in bacteria (DUF2256). | 0.881 |
ARD21205.1 | ARD21207.1 | SJ2017_0874 | SJ2017_0876 | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | Cryptochrome/photolyase family protein; Pfam:pfam04244 Deoxyribodipyrimidine photo-lyase-related protein. | 0.953 |
ARD21205.1 | ARD21208.1 | SJ2017_0874 | SJ2017_0877 | FAD-binding protein; Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam01613 Flavin reductase like domain. | 0.698 |
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