STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD21317.1Amidohydrolase; Pfam:pfam07969 Amidohydrolase family. (551 aa)    
Predicted Functional Partners:
ARD20846.1
Hypothetical protein; Pfam:pfam04186 FxsA cytoplasmic membrane protein.
  
    0.799
ARD20362.1
Amidohydrolase; Pfam:pfam00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region.
 
     0.657
ARD22466.1
Acyl-peptide hydrolase; Pfam:pfam00326 Prolyl oligopeptidase family.
 
     0.529
ARD20383.1
Amidohydrolase; Pfam:pfam13594 Amidohydrolase.
  
     0.492
ARD22465.1
Imidazolonepropionase; Pfam:pfam01979 Amidohydrolase family.
  
     0.488
ARD21306.1
Xaa-Pro dipeptidase; Pfam:pfam01979 Amidohydrolase family.
  
     0.486
ARD20384.1
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
  
     0.426
ARD24070.1
Peptidase S9; Pfam:pfam00326 Prolyl oligopeptidase family.
 
     0.412
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.