STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD21494.1Nitrite reductase; Pfam:pfam02335 Cytochrome c552. (468 aa)    
Predicted Functional Partners:
ARD20911.1
Hydroxylamine reductase; Pfam:pfam03063 Prismane/CO dehydrogenase family.
 
  
 0.930
ARD22009.1
Nitrite reductase (NAD(P)H) large subunit; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.916
ARD21183.1
Nitrite reductase; Pfam:pfam02335 Cytochrome c552.
  
  
 
0.914
ARD21059.1
Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase.
  
  
 0.912
ARD21929.1
Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase.
  
  
 0.911
ARD23680.1
Ammonia-forming cytochrome c nitrite reductase, c552 subunit; Pfam:pfam02335 Cytochrome c552.
  
  
 
0.909
ARD22010.1
Nitrite reductase (NAD(P)H), small subunit; Pfam:pfam13806 Rieske-like [2Fe-2S] domain.
   
 
 0.907
ARD21058.1
Pfam:pfam03892 Nitrate reductase cytochrome c-type subunit (NapB).
  
 
 0.906
ARD21930.1
Pfam:pfam03892 Nitrate reductase cytochrome c-type subunit (NapB).
  
 
 0.906
ARD20602.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
     
 0.902
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
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