Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20841.1 | ARD21551.1 | SJ2017_0503 | SJ2017_1226 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | 0.785 |
ARD20841.1 | ARD21900.1 | SJ2017_0503 | SJ2017_1583 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | 0.906 |
ARD20841.1 | ARD22724.1 | SJ2017_0503 | SJ2017_2434 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Succinate dehydrogenase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.924 |
ARD20841.1 | ARD24007.1 | SJ2017_0503 | SJ2017_3769 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.921 |
ARD20841.1 | ARD24129.1 | SJ2017_0503 | SJ2017_3900 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.929 |
ARD20943.1 | ARD21551.1 | SJ2017_0605 | SJ2017_1226 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | 0.768 |
ARD20943.1 | ARD24007.1 | SJ2017_0605 | SJ2017_3769 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.508 |
ARD20943.1 | ARD24128.1 | SJ2017_0605 | SJ2017_3899 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Flavocytochrome c heme subunit; Pfam:pfam14537 Cytochrome c3. | 0.645 |
ARD20943.1 | ARD24129.1 | SJ2017_0605 | SJ2017_3900 | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.768 |
ARD21551.1 | ARD20841.1 | SJ2017_1226 | SJ2017_0503 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | 0.785 |
ARD21551.1 | ARD20943.1 | SJ2017_1226 | SJ2017_0605 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | 0.768 |
ARD21551.1 | ARD21552.1 | SJ2017_1226 | SJ2017_1227 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Hypothetical protein. | 0.831 |
ARD21551.1 | ARD21900.1 | SJ2017_1226 | SJ2017_1583 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Flavocytochrome c; Pfam:pfam00890 FAD binding domain. | 0.785 |
ARD21551.1 | ARD22004.1 | SJ2017_1226 | SJ2017_1691 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Tetraheme cytochrome c-type; Pfam:pfam14537 Cytochrome c3. | 0.767 |
ARD21551.1 | ARD22724.1 | SJ2017_1226 | SJ2017_2434 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Succinate dehydrogenase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.856 |
ARD21551.1 | ARD24007.1 | SJ2017_1226 | SJ2017_3769 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.862 |
ARD21551.1 | ARD24128.1 | SJ2017_1226 | SJ2017_3899 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Flavocytochrome c heme subunit; Pfam:pfam14537 Cytochrome c3. | 0.768 |
ARD21551.1 | ARD24129.1 | SJ2017_1226 | SJ2017_3900 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Fumarate reductase flavoprotein subunit; Pfam:pfam00890 FAD binding domain. | 0.785 |
ARD21551.1 | ARD24353.1 | SJ2017_1226 | SJ2017_4126 | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | Pfam:pfam14537 Cytochrome c3. | 0.768 |
ARD21552.1 | ARD21551.1 | SJ2017_1227 | SJ2017_1226 | Hypothetical protein. | Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase. | 0.831 |
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