Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20904.1 | ARD21679.1 | SJ2017_0566 | SJ2017_1355 | Hypothetical protein. | Membrane protein; Pfam:pfam01103 Surface antigen. | 0.760 |
ARD20904.1 | ARD22959.1 | SJ2017_0566 | SJ2017_2672 | Hypothetical protein. | Potassium channel protein; Pfam:pfam07885 Ion channel. | 0.552 |
ARD20904.1 | ARD23138.1 | SJ2017_0566 | SJ2017_2859 | Hypothetical protein. | Hypothetical protein. | 0.648 |
ARD20904.1 | ARD23671.1 | SJ2017_0566 | SJ2017_3420 | Hypothetical protein. | Pfam:pfam06629 MltA-interacting protein MipA. | 0.621 |
ARD20904.1 | ARD23744.1 | SJ2017_0566 | SJ2017_3495 | Hypothetical protein. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.678 |
ARD20936.1 | ARD21679.1 | SJ2017_0598 | SJ2017_1355 | Hypothetical protein. | Membrane protein; Pfam:pfam01103 Surface antigen. | 0.790 |
ARD20936.1 | ARD22139.1 | SJ2017_0598 | SJ2017_1831 | Hypothetical protein. | Outer membrane protein assembly factor BamC; Pfam:pfam06804 NlpB/DapX lipoprotein. | 0.901 |
ARD20936.1 | ARD23605.1 | SJ2017_0598 | SJ2017_3352 | Hypothetical protein. | Pfam:pfam13525 Outer membrane lipoprotein. | 0.900 |
ARD20936.1 | ARD23744.1 | SJ2017_0598 | SJ2017_3495 | Hypothetical protein. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.820 |
ARD21394.1 | ARD21679.1 | SJ2017_1063 | SJ2017_1355 | Pfam:pfam04338 Protein of unknown function, DUF481. | Membrane protein; Pfam:pfam01103 Surface antigen. | 0.753 |
ARD21394.1 | ARD22959.1 | SJ2017_1063 | SJ2017_2672 | Pfam:pfam04338 Protein of unknown function, DUF481. | Potassium channel protein; Pfam:pfam07885 Ion channel. | 0.632 |
ARD21394.1 | ARD23744.1 | SJ2017_1063 | SJ2017_3495 | Pfam:pfam04338 Protein of unknown function, DUF481. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.632 |
ARD21679.1 | ARD20904.1 | SJ2017_1355 | SJ2017_0566 | Membrane protein; Pfam:pfam01103 Surface antigen. | Hypothetical protein. | 0.760 |
ARD21679.1 | ARD20936.1 | SJ2017_1355 | SJ2017_0598 | Membrane protein; Pfam:pfam01103 Surface antigen. | Hypothetical protein. | 0.790 |
ARD21679.1 | ARD21394.1 | SJ2017_1355 | SJ2017_1063 | Membrane protein; Pfam:pfam01103 Surface antigen. | Pfam:pfam04338 Protein of unknown function, DUF481. | 0.753 |
ARD21679.1 | ARD22139.1 | SJ2017_1355 | SJ2017_1831 | Membrane protein; Pfam:pfam01103 Surface antigen. | Outer membrane protein assembly factor BamC; Pfam:pfam06804 NlpB/DapX lipoprotein. | 0.849 |
ARD21679.1 | ARD22959.1 | SJ2017_1355 | SJ2017_2672 | Membrane protein; Pfam:pfam01103 Surface antigen. | Potassium channel protein; Pfam:pfam07885 Ion channel. | 0.743 |
ARD21679.1 | ARD23138.1 | SJ2017_1355 | SJ2017_2859 | Membrane protein; Pfam:pfam01103 Surface antigen. | Hypothetical protein. | 0.755 |
ARD21679.1 | ARD23306.1 | SJ2017_1355 | SJ2017_3029 | Membrane protein; Pfam:pfam01103 Surface antigen. | Outer membrane protein assembly factor BamB; Pfam:pfam13360 PQQ-like domain. | 0.790 |
ARD21679.1 | ARD23605.1 | SJ2017_1355 | SJ2017_3352 | Membrane protein; Pfam:pfam01103 Surface antigen. | Pfam:pfam13525 Outer membrane lipoprotein. | 0.855 |
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