Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD21681.1 | ARD21682.1 | SJ2017_1357 | SJ2017_1358 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | 0.995 |
ARD21681.1 | ARD21683.1 | SJ2017_1357 | SJ2017_1359 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | 0.951 |
ARD21681.1 | ARD21684.1 | SJ2017_1357 | SJ2017_1360 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | 0.441 |
ARD21681.1 | ARD22162.1 | SJ2017_1357 | SJ2017_1856 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.755 |
ARD21681.1 | ARD22539.1 | SJ2017_1357 | SJ2017_2249 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Arsenate reductase; Pfam:pfam03960 ArsC family. | 0.651 |
ARD21681.1 | ARD22686.1 | SJ2017_1357 | SJ2017_2396 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.770 |
ARD21682.1 | ARD21681.1 | SJ2017_1358 | SJ2017_1357 | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.995 |
ARD21682.1 | ARD21683.1 | SJ2017_1358 | SJ2017_1359 | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | 0.952 |
ARD21682.1 | ARD21684.1 | SJ2017_1358 | SJ2017_1360 | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | 0.441 |
ARD21682.1 | ARD22162.1 | SJ2017_1358 | SJ2017_1856 | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.695 |
ARD21682.1 | ARD22686.1 | SJ2017_1358 | SJ2017_2396 | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.764 |
ARD21683.1 | ARD21681.1 | SJ2017_1359 | SJ2017_1357 | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.951 |
ARD21683.1 | ARD21682.1 | SJ2017_1359 | SJ2017_1358 | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | 0.952 |
ARD21683.1 | ARD21684.1 | SJ2017_1359 | SJ2017_1360 | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | 0.445 |
ARD21683.1 | ARD22162.1 | SJ2017_1359 | SJ2017_1856 | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.505 |
ARD21683.1 | ARD22686.1 | SJ2017_1359 | SJ2017_2396 | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.653 |
ARD21684.1 | ARD21681.1 | SJ2017_1360 | SJ2017_1357 | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.441 |
ARD21684.1 | ARD21682.1 | SJ2017_1360 | SJ2017_1358 | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | Ribosomal protein S6 modification protein; Pfam:pfam08443 RimK-like ATP-grasp domain. | 0.441 |
ARD21684.1 | ARD21683.1 | SJ2017_1360 | SJ2017_1359 | 2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. | Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family. | 0.445 |
ARD22162.1 | ARD21681.1 | SJ2017_1856 | SJ2017_1357 | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | Hypothetical protein; Pfam:pfam05618 Putative ATP-dependant zinc protease. | 0.755 |
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