Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD21056.1 | ARD21145.1 | SJ2017_0719 | SJ2017_0811 | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | Thrombospondin type 3 repeat-/CalX-beta domain-containing protein. | 0.540 |
ARD21056.1 | ARD21793.1 | SJ2017_0719 | SJ2017_1474 | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | Hypothetical protein. | 0.445 |
ARD21056.1 | ARD21828.1 | SJ2017_0719 | SJ2017_1509 | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | Pfam:pfam04367 Protein of unknown function (DUF502). | 0.627 |
ARD21145.1 | ARD21056.1 | SJ2017_0811 | SJ2017_0719 | Thrombospondin type 3 repeat-/CalX-beta domain-containing protein. | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | 0.540 |
ARD21145.1 | ARD21793.1 | SJ2017_0811 | SJ2017_1474 | Thrombospondin type 3 repeat-/CalX-beta domain-containing protein. | Hypothetical protein. | 0.562 |
ARD21219.1 | ARD21793.1 | SJ2017_0888 | SJ2017_1474 | EamA family transporter. | Hypothetical protein. | 0.468 |
ARD21793.1 | ARD21056.1 | SJ2017_1474 | SJ2017_0719 | Hypothetical protein. | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | 0.445 |
ARD21793.1 | ARD21145.1 | SJ2017_1474 | SJ2017_0811 | Hypothetical protein. | Thrombospondin type 3 repeat-/CalX-beta domain-containing protein. | 0.562 |
ARD21793.1 | ARD21219.1 | SJ2017_1474 | SJ2017_0888 | Hypothetical protein. | EamA family transporter. | 0.468 |
ARD21793.1 | ARD21828.1 | SJ2017_1474 | SJ2017_1509 | Hypothetical protein. | Pfam:pfam04367 Protein of unknown function (DUF502). | 0.562 |
ARD21828.1 | ARD21056.1 | SJ2017_1509 | SJ2017_0719 | Pfam:pfam04367 Protein of unknown function (DUF502). | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. | 0.627 |
ARD21828.1 | ARD21793.1 | SJ2017_1509 | SJ2017_1474 | Pfam:pfam04367 Protein of unknown function (DUF502). | Hypothetical protein. | 0.562 |