Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20362.1 | ARD22432.1 | SJ2017_0009 | SJ2017_2134 | Amidohydrolase; Pfam:pfam00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region. | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | 0.403 |
ARD20979.1 | ARD22432.1 | SJ2017_0641 | SJ2017_2134 | Polyketide cyclase. | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | 0.432 |
ARD22432.1 | ARD20362.1 | SJ2017_2134 | SJ2017_0009 | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | Amidohydrolase; Pfam:pfam00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region. | 0.403 |
ARD22432.1 | ARD20979.1 | SJ2017_2134 | SJ2017_0641 | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | Polyketide cyclase. | 0.432 |
ARD22432.1 | ARD22433.1 | SJ2017_2134 | SJ2017_2135 | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | Diguanylate cyclase; Pfam:pfam00990 GGDEF domain. | 0.528 |
ARD22432.1 | ARD23735.1 | SJ2017_2134 | SJ2017_3486 | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | Enterobactin/ferric enterobactin esterase; Pfam:pfam00756 Putative esterase. | 0.438 |
ARD22432.1 | ARD24158.1 | SJ2017_2134 | SJ2017_3929 | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | Phosphoheptose isomerase; Pfam:pfam13580 SIS domain. | 0.407 |
ARD22433.1 | ARD22432.1 | SJ2017_2135 | SJ2017_2134 | Diguanylate cyclase; Pfam:pfam00990 GGDEF domain. | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | 0.528 |
ARD23735.1 | ARD22432.1 | SJ2017_3486 | SJ2017_2134 | Enterobactin/ferric enterobactin esterase; Pfam:pfam00756 Putative esterase. | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | 0.438 |
ARD24158.1 | ARD22432.1 | SJ2017_3929 | SJ2017_2134 | Phosphoheptose isomerase; Pfam:pfam13580 SIS domain. | Hypothetical protein; Pfam:pfam03795 YCII-related domain. | 0.407 |